Transcript: ENST00000486621.1 TTC4-004

Description

tetratricopeptide repeat domain 4 [Source:HGNC Symbol;Acc:12394]

Gene Synonyms

FLJ41930, MGC5097

Location

About this transcript

This transcript has 3 exons, is associated with 889 variant alleles and maps to 117 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371281.3	TTC4-001	2395	387aa	ENSP00000360329.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS596	O95801	NM_004623.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371284.5	TTC4-002	2124	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000486091.1	TTC4-003	1873	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000486621.1	TTC4-004	549	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 549 bps,

Version

ENST00000486621.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000027435 (version 2)