Transcript: ENST00000487374.1 ATP5O-008

Description

ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit [Source:HGNC Symbol;Acc:850]

Gene Synonyms

ATPO, OSCP

Location

Chromosome 21: 35,284,682-35,288,083 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 1414 variant alleles and maps to 165 oligo probes.

Gene

This transcript is a product of gene ENSG00000241837.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000290299.2	ATP5O-001	932	213aa	ENSP00000290299.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13634	P48047	NM_001697.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418933.1	ATP5O-010	415	86aa	ENSP00000393211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000431254.1	ATP5O-003	583	74aa	ENSP00000393496.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000417181.1	ATP5O-009	462	40aa	ENSP00000407220.1	Nonsense mediated decay		H7C2P9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429064.1	ATP5O-012	442	26aa	ENSP00000403964.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000496044.1	ATP5O-007	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487374.1	ATP5O-008	469	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484627.1	ATP5O-011	157	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491703.1	ATP5O-002	2839	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495005.1	ATP5O-004	586	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 469 bps,

Version

ENST00000487374.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000315810 (version 1)

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Transcript: ENST00000487374.1 ATP5O-008

Summary