Transcript: ENST00000397261.3 ARPC4-001

Description

actin related protein 2/3 complex, subunit 4, 20kDa [Source:HGNC Symbol;Acc:707]

Gene Synonyms

ARC20, P20-ARC, p20-Arc

Location

Chromosome 3: 9,834,242-9,849,410 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 8098 variant alleles and maps to 560 oligo probes.

Gene

This transcript is a product of gene ENSG00000241553.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000433034.1	ARPC4-010	926	187aa	ENSP00000388169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56238	P59998 R4GN08	NM_001198780.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397261.3	ARPC4-001	2582	168aa	ENSP00000380431.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43047	P59998 R4GN08	NM_005718.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000287613.7	ARPC4-201	1412	78aa	ENSP00000287613.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46743	P59998 R4GN08	NM_001024960.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000498623.2	ARPC4-005	942	78aa	ENSP00000432235.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46743	P59998 R4GN08	NM_001024959.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485273.1	ARPC4-009	577	77aa	ENSP00000473435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GN08	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417500.1	ARPC4-003	957	44aa	ENSP00000414751.1	Nonsense mediated decay		F8WDW3	-	-
ENST00000440787.1	ARPC4-002	910	113aa	ENSP00000395085.1	Nonsense mediated decay		F8WDD7	-	-
ENST00000467289.1	ARPC4-008	729	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479956.1	ARPC4-004	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,582 bps, Translation length: 168 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P59998

CCDS

This transcript is a member of the Human CCDS set: CCDS43047

Version

ENST00000397261.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000258275 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000397261.3 ARPC4-001

Summary