Transcript: ENST00000476392.1 SSX2-003

Description

synovial sarcoma, X breakpoint 2 [Source:HGNC Symbol;Acc:11336]

Gene Synonyms

CT5.2, CT5.2A, CT5.2a, CT5.2b, HD21, HOM-MEL-40, MGC119055, MGC15364, MGC3884, SSX, SSX2A

Location

About this transcript

This transcript has 4 exons, is associated with 415 variant alleles and maps to 957 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000336777.5	SSX2-001	1410	223aa	ENSP00000338796.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14345	Q16385 Q9NZK4	NM_003147.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000337502.5	SSX2-002	1292	188aa	ENSP00000338561.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14344	Q16385	NM_175698.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000476392.1	SSX2-003	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 677 bps,

Version

ENST00000476392.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000058901 (version 1)