Transcript: ENST00000542931.1 TDGF1-201

Description

teratocarcinoma-derived growth factor 1 [Source:HGNC Symbol;Acc:11701]

Gene Synonyms

CR, CRGF, CRIPTO, Cripto-1

Location

Chromosome 3: 46,616,045-46,623,950 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 3540 variant alleles and maps to 304 oligo probes.

Gene

This transcript is a product of gene ENSG00000241186.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296145.5	TDGF1-001	2513	188aa	ENSP00000296145.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2742	F5H1T8 P13385	NM_003212.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542931.1	TDGF1-201	1771	172aa	ENSP00000446375.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54575	F5H1T8	NM_001174136.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444264.1	TDGF1-006	1826	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505797.1	TDGF1-005	291	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471721.1	TDGF1-002	704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493282.1	TDGF1-004	643	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459867.1	TDGF1-003	266	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,771 bps, Translation length: 172 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54575

Version

ENST00000542931.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000542931.1 TDGF1-201

Summary