Transcript: ENST00000484357.1 ARHGEF25-009

Description

Rho guanine nucleotide exchange factor (GEF) 25 [Source:HGNC Symbol;Acc:30275]

Gene Synonyms

GEFT, p63RhoGEF

Location

Chromosome 12: 58,008,356-58,008,814 forward strand.

About this transcript

This transcript has 2 exons, is associated with 228 variant alleles and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000240771.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000333972.7	ARHGEF25-003	2246	619aa	ENSP00000335560.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44931	Q86VW2	NM_001111270.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000286494.4	ARHGEF25-001	2552	580aa	ENSP00000286494.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8947	Q86VW2	NM_182947.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000477314.1	ARHGEF25-002	687	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471370.1	ARHGEF25-004	1945	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469072.1	ARHGEF25-007	668	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000466399.1	ARHGEF25-008	593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000484357.1	ARHGEF25-009	274	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 274 bps,

Version

ENST00000484357.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335061 (version 1)

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Transcript: ENST00000484357.1 ARHGEF25-009

Summary