Transcript: ENST00000414474.1 PSMB9-006

Description

proteasome (prosome, macropain) subunit, beta type, 9 [Source:HGNC Symbol;Acc:9546]

Gene Synonyms

LMP2, PSMB6i, RING12, beta1i

Location

Chromosome 6: 32,812,613-32,826,214 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 6007 variant alleles and maps to 1139 oligo probes.

Gene

This transcript is a product of gene ENSG00000240065.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000374859.2	PSMB9-001	782	219aa	ENSP00000363993.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4759	A2ACR0 A2ACR1 P28065	NM_002800.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395330.1	PSMB9-005	792	196aa	ENSP00000378739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ACR0 A2ACR1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000453265.2	PSMB9-202	534	154aa	ENSP00000394773.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZW2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414474.1	PSMB9-006	439	131aa	ENSP00000394363.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ACR0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000464863.1	PSMB9-002	2676	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467593.1	PSMB9-004	730	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 439 bps, Translation length: 131 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000414474.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000276219 (version 1)

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Transcript: ENST00000414474.1 PSMB9-006

Summary