Transcript: ENST00000469459.1 TXNDC5-004

Description

thioredoxin domain containing 5 (endoplasmic reticulum) [Source:HGNC Symbol;Acc:21073]

Gene Synonyms

BLOC1S5-TXNDC5, ENDOPDI, ERP46, ERp46, EndoPDI, FLJ21353, FLJ90810, HCC-2, Hcc-2, MGC3178, PDIA15, STRF8, TLP46, UNQ364

Location

Chromosome 6: 7,895,388-7,900,475 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2179 variant alleles and maps to 115 oligo probes.

Gene

This transcript is a product of gene ENSG00000239264.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379757.4	TXNDC5-001	2964	432aa	ENSP00000369081.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4505	Q658S9 Q6EHZ3 Q8NBS9	NM_030810.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539054.1	TXNDC5-201	2977	360aa	ENSP00000442453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86UY0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473453.1	TXNDC5-003	1301	324aa	ENSP00000420784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47369	Q8NBS9	NM_001145549.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460138.1	TXNDC5-002	2704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469459.1	TXNDC5-004	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475802.1	TXNDC5-005	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 715 bps,

Version

ENST00000469459.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348958 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000469459.1 TXNDC5-004

Summary