Transcript: ENST00000379757.4 TXNDC5-001

Description

thioredoxin domain containing 5 (endoplasmic reticulum) [Source:HGNC Symbol;Acc:21073]

Gene Synonyms

BLOC1S5-TXNDC5, ENDOPDI, ERP46, ERp46, EndoPDI, FLJ21353, FLJ90810, HCC-2, Hcc-2, MGC3178, PDIA15, STRF8, TLP46, UNQ364

Location

Chromosome 6: 7,881,750-7,911,047 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 24 domains and features, is associated with 14132 variant alleles and maps to 553 oligo probes.

Gene

This transcript is a product of gene ENSG00000239264.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000379757.4	TXNDC5-001	2964	432aa	ENSP00000369081.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4505	Q658S9 Q6EHZ3 Q8NBS9	NM_030810.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539054.1	TXNDC5-201	2977	360aa	ENSP00000442453.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q86UY0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000473453.1	TXNDC5-003	1301	324aa	ENSP00000420784.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47369	Q8NBS9	NM_001145549.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460138.1	TXNDC5-002	2704	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000469459.1	TXNDC5-004	715	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475802.1	TXNDC5-005	582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,964 bps, Translation length: 432 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NBS9

CCDS

This transcript is a member of the Human CCDS set: CCDS4505

Version

ENST00000379757.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000039792 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000379757.4 TXNDC5-001

Summary