Transcript: ENST00000371315.3 MCTS1-002

Description

malignant T cell amplified sequence 1 [Source:HGNC Symbol;Acc:23357]

Gene Synonyms

MCT-1, MCT1

Location

Chromosome X: 119,738,176-119,746,167 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 9 domains and features, is associated with 2147 variant alleles and maps to 300 oligo probes.

Gene

This transcript is a product of gene ENSG00000232119.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000371315.3	MCTS1-002	1130	182aa	ENSP00000360365.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48160	Q9ULC4	NM_001137554.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000371317.5	MCTS1-001	1018	181aa	ENSP00000360367.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14601	Q9ULC4	NM_014060.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000487133.1	MCTS1-004	766	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493274.1	MCTS1-003	732	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000424799.1	MCTS1-007	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493879.1	MCTS1-005	619	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484481.1	MCTS1-006	398	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,130 bps, Translation length: 182 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9ULC4

CCDS

This transcript is a member of the Human CCDS set: CCDS48160

Version

ENST00000371315.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000058111 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000371315.3 MCTS1-002

Summary