Transcript: ENST00000316509.6 VAMP2-001

Description

vesicle-associated membrane protein 2 (synaptobrevin 2) [Source:HGNC Symbol;Acc:12643]

Gene Synonyms

SYB2, VAMP-2

Location

About this transcript

This transcript has 5 exons, is annotated with 14 domains and features, is associated with 2314 variant alleles and maps to 444 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316509.6	VAMP2-001	2153	116aa	ENSP00000314214.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32561	P63027	NM_014232.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000404970.3	VAMP2-002	1479	68aa	ENSP00000466995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ENK9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000488857.1	VAMP2-003	874	118aa	ENSP00000418572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8WCA0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481878.1	VAMP2-004	557	113aa	ENSP00000467399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QRU4 K7ENK9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,153 bps, Translation length: 116 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P63027

CCDS

This transcript is a member of the Human CCDS set: CCDS32561

Version

ENST00000316509.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000317118 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.