Transcript: ENST00000316073.3 RPTN-001

Description

repetin [Source:HGNC Symbol;Acc:26809]

Gene Synonyms

FLJ39117

Location

About this transcript

This transcript has 3 exons, is annotated with 11 domains and features, is associated with 3362 variant alleles and maps to 272 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316073.3	RPTN-001	3569	784aa	ENSP00000317895.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41397	Q2M1U7 Q6XPR3 Q8N1M7	NM_001122965.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,569 bps, Translation length: 784 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6XPR3

CCDS

This transcript is a member of the Human CCDS set: CCDS41397

Version

ENST00000316073.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000333867 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.