Transcript: ENST00000400549.1 DEFB116-001

Description

defensin, beta 116 [Source:HGNC Symbol;Acc:18097]

Gene Synonyms

DEFB-16, DEFB16

Location

About this transcript

This transcript has 2 exons, is annotated with 5 domains and features, is associated with 3006 variant alleles and maps to 131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000400549.1	DEFB116-001	309	102aa	ENSP00000383396.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42860	Q30KQ4	NM_001037731.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 309 bps, Translation length: 102 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q30KQ4

CCDS

This transcript is a member of the Human CCDS set: CCDS42860

Version

ENST00000400549.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000354403 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.