Transcript: ENST00000399543.1 AC025171.1-001

Location

Chromosome 5: 43,042,195-43,045,492 forward strand.

About this transcript

This transcript has 2 exons, is associated with 3104 variant alleles and maps to 319 oligo probes.

Gene

This transcript is a product of gene ENSG00000215068.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000451894.2	AC025171.1-002	1218	No protein	-	Transcripts that overlap the genomic span (i.e. exon or introns) of a protein-coding locus on the opposite strand.Antisense	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000505541.1	AC025171.1-005	402	No protein	-	Transcripts that overlap the genomic span (i.e. exon or introns) of a protein-coding locus on the opposite strand.Antisense	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399543.1	AC025171.1-001	2423	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000508913.1	AC025171.1-003	2311	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000515108.1	AC025171.1-004	2005	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,423 bps,

Version

ENST00000399543.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253837 (version 1)

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Transcript: ENST00000399543.1 AC025171.1-001

Summary