Transcript: ENST00000397381.4 UCA1-001

Description

urothelial cancer associated 1 (non-protein coding) [Source:HGNC Symbol;Acc:37126]

Gene Synonyms

CUDR, LINC00178, NCRNA00178, UCAT1

Location

About this transcript

This transcript has 3 exons, is associated with 2996 variant alleles and maps to 364 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq	Flags
ENST00000600160.2	UCA1-003	436	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENST00000397381.4	UCA1-001	2299	No protein	-	lincRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000589333.2	UCA1-002	433	No protein	-	lincRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,299 bps,

Version

ENST00000397381.4

Type

LincRNA

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000362098 (version 19)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.