Transcript: ENST00000381519.1 MRPL23-007

Description

mitochondrial ribosomal protein L23 [Source:HGNC Symbol;Acc:10322]

Gene Synonyms

L23MRP, RPL23, RPL23L

Location

Chromosome 11: 1,968,508-1,977,839 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 3024 variant alleles and maps to 269 oligo probes.

Gene

This transcript is a product of gene ENSG00000214026.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000397298.3	MRPL23-001	736	153aa	ENSP00000380466.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31336	Q16540	NM_021134.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381514.3	MRPL23-002	919	163aa	ENSP00000370925.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NJD9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381519.1	MRPL23-007	643	153aa	ENSP00000370930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31336	Q16540	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397297.3	MRPL23-009	613	191aa	ENSP00000380465.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVT4 A8MYK1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000397294.3	MRPL23-011	551	166aa	ENSP00000380462.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MVT4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000429295.1	MRPL23-003	805	118aa	ENSP00000407156.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486931.1	MRPL23-008	745	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000462288.1	MRPL23-004	659	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000484918.1	MRPL23-005	232	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000466346.1	MRPL23-006	736	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 643 bps, Translation length: 153 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q16540

CCDS

This transcript is a member of the Human CCDS set: CCDS31336

Version

ENST00000381519.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000142894 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

EMBL-EBI User Survey 2024

Favourite species

All species

Recent locations

Transcript: ENST00000381519.1 MRPL23-007

Summary