Transcript: ENST00000359543.3 EMP2-001

Description

epithelial membrane protein 2 [Source:HGNC Symbol;Acc:3334]

Gene Synonyms

XMP

Location

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 27884 variant alleles and maps to 621 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359543.3	EMP2-001	5197	167aa	ENSP00000352540.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10541	P54851	NM_001424.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536829.1	EMP2-003	781	167aa	ENSP00000445712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10541	P54851	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566033.1	EMP2-005	580	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000342147.4	EMP2-002	3582	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 5,197 bps, Translation length: 167 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54851

CCDS

This transcript is a member of the Human CCDS set: CCDS10541

Version

ENST00000359543.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251965 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.