Transcript: ENST00000443120.1 ANKRD39-002

Description

ankyrin repeat domain 39 [Source:HGNC Symbol;Acc:28640]

Gene Synonyms

MGC41816

Location

About this transcript

This transcript has 9 exons, is annotated with 15 domains and features, is associated with 10074 variant alleles and maps to 747 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393537.4	ANKRD39-001	976	183aa	ENSP00000377170.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2028	Q53RE8	NM_016466.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443120.1	ANKRD39-002	4965	183aa	ENSP00000398321.1	Nonsense mediated decay	CCDS2028	Q53RE8	-	-

Summary

Statistics

Exons: 9, Coding exons: 4, Transcript length: 4,965 bps, Translation length: 183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q53RE8

CCDS

This transcript is a member of the Human CCDS set: CCDS2028

Version

ENST00000443120.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000339490 (version 1)