Transcript: ENST00000426563.1 TCTEX1D2-004

Description

Tctex1 domain containing 2 [Source:HGNC Symbol;Acc:28482]

Gene Synonyms

MGC33212

Location

About this transcript

This transcript has 5 exons, is associated with 12308 variant alleles and maps to 258 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000325318.5	TCTEX1D2-001	673	142aa	ENSP00000324323.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33929	E7ESA3 Q8WW35	NM_152773.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446494.1	TCTEX1D2-002	800	132aa	ENSP00000410605.1	Nonsense mediated decay		E7ER86	-	-
ENST00000426563.1	TCTEX1D2-004	603	45aa	ENSP00000415835.1	Nonsense mediated decay		F8WD40	-	-
ENST00000491186.1	TCTEX1D2-006	359	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465757.1	TCTEX1D2-005	457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 603 bps, Translation length: 45 residues

Version

ENST00000426563.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341169 (version 1)