Transcript: ENST00000479234.1 SCAF8-004

Description

SR-related CTD-associated factor 8 [Source:HGNC Symbol;Acc:20959]

Gene Synonyms

CCAP7, KIAA1116, RBM16

Location

Chromosome 6: 155,143,296-155,146,076 forward strand.

About this transcript

This transcript has 2 exons, is associated with 1265 variant alleles and maps to 49 oligo probes.

Gene

This transcript is a product of gene ENSG00000213079.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367178.3	SCAF8-001	5055	1271aa	ENSP00000356146.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5247	Q8NDE9 Q9H8B2 Q9UPN6	NM_014892.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417268.1	SCAF8-202	4709	1271aa	ENSP00000413098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5247	Q8NDE9 Q9H8B2 Q9UPN6	NM_001286199.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367186.4	SCAF8-201	4684	1337aa	ENSP00000356154.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69226	B7Z876 B7Z888 Q8NDE9 Q9H8B2	NM_001286189.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461219.1	SCAF8-002	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464628.1	SCAF8-003	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479234.1	SCAF8-004	281	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 281 bps,

Version

ENST00000479234.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000042801 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000479234.1 SCAF8-004

Summary