Transcript: ENST00000417268.1 SCAF8-202

Description

SR-related CTD-associated factor 8 [Source:HGNC Symbol;Acc:20959]

Gene Synonyms

CCAP7, KIAA1116, RBM16

Location

Chromosome 6: 155,054,512-155,155,190 forward strand.

About this transcript

This transcript has 21 exons, is annotated with 27 domains and features, is associated with 49260 variant alleles and maps to 684 oligo probes.

Gene

This transcript is a product of gene ENSG00000213079.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367178.3	SCAF8-001	5055	1271aa	ENSP00000356146.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5247	Q8NDE9 Q9H8B2 Q9UPN6	NM_014892.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417268.1	SCAF8-202	4709	1271aa	ENSP00000413098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5247	Q8NDE9 Q9H8B2 Q9UPN6	NM_001286199.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367186.4	SCAF8-201	4684	1337aa	ENSP00000356154.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS69226	B7Z876 B7Z888 Q8NDE9 Q9H8B2	NM_001286189.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000461219.1	SCAF8-002	677	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464628.1	SCAF8-003	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000479234.1	SCAF8-004	281	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 4,709 bps, Translation length: 1,271 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UPN6

CCDS

This transcript is a member of the Human CCDS set: CCDS5247

Version

ENST00000417268.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000417268.1 SCAF8-202

Summary