Transcript: ENST00000388825.4 GPX3-001

Description

glutathione peroxidase 3 (plasma) [Source:HGNC Symbol;Acc:4555]

Gene Synonyms

GPXP, GPx-P, GSHPx-3, GSHPx-P

Location

Chromosome 5: 150,400,124-150,408,554 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 13 domains and features, is associated with 3620 variant alleles and maps to 519 oligo probes.

Gene

This transcript is a product of gene ENSG00000211445.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000388825.4	GPX3-001	1636	226aa	ENSP00000373477.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43389	P22352 Q6NXQ3	NM_002084.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521632.1	GPX3-003	1314	174aa	ENSP00000430743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000517973.1	GPX3-010	612	100aa	ENSP00000429709.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521650.1	GPX3-004	467	138aa	ENSP00000427873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520059.1	GPX3-008	316	79aa	ENSP00000429314.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519214.1	GPX3-006	834	63aa	ENSP00000430508.1	Nonsense mediated decay		-	-	-
ENST00000521722.1	GPX3-009	464	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520597.1	GPX3-007	632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,636 bps, Translation length: 226 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P22352

CCDS

This transcript is a member of the Human CCDS set: CCDS43389

Version

ENST00000388825.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000374772 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000388825.4 GPX3-001

Summary