Transcript: ENST00000481710.1 SMIM11-001

Description

small integral membrane protein 11 [Source:HGNC Symbol;Acc:1293]

Gene Synonyms

C21orf51, FAM165B

Location

Chromosome 21: 35,747,779-35,775,075 forward strand.

About this transcript

This transcript has 5 exons, is associated with 3622 variant alleles and maps to 289 oligo probes.

Gene

This transcript is a product of gene ENSG00000205670.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000399295.2	SMIM11-004	1074	58aa	ENSP00000382234.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33550	P58511	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399299.1	SMIM11-002	1033	68aa	ENSP00000382238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8TCY0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000399292.3	SMIM11-003	850	58aa	ENSP00000382231.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33550	P58511	NM_058182.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000481710.1	SMIM11-001	1220	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495363.1	SMIM11-006	1029	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474455.1	SMIM11-005	1857	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000489469.1	SMIM11-007	780	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 1,220 bps,

Version

ENST00000481710.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000194075 (version 2)

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Transcript: ENST00000481710.1 SMIM11-001

Summary