Transcript: ENST00000380685.1 C9orf92-001

Description

chromosome 9 open reading frame 92 [Source:HGNC Symbol;Acc:19054]

Gene Synonyms

Em:AL513424.1

Location

About this transcript

This transcript has 4 exons, is associated with 38657 variant alleles and maps to 121 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380683.1	C9orf92-002	359	108aa	ENSP00000370058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS65012	A6NGG3	NM_001271829.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000380685.1	C9orf92-001	379	77aa	ENSP00000370060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NGG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000433347.1	C9orf92-003	219	73aa	ENSP00000412109.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 379 bps, Translation length: 77 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6NGG3

Version

ENST00000380685.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000051773 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.