Transcript: ENST00000389022.4 NT5M-007

Description

5',3'-nucleotidase, mitochondrial [Source:HGNC Symbol;Acc:15769]

Gene Synonyms

DNT2, dNT-2, dNT2, mdN

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 20423 variant alleles and maps to 316 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000389022.4	NT5M-007	1617	228aa	ENSP00000373674.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32581	Q2I378 Q9NPB1	NM_020201.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483704.1	NT5M-003	1408	51aa	ENSP00000467567.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470418.1	NT5M-004	895	93aa	ENSP00000463674.1	Nonsense mediated decay		J3QLR5	-	-
ENST00000478373.2	NT5M-002	771	113aa	ENSP00000464303.1	Nonsense mediated decay		J3QRN4	-	-
ENST00000582909.1	NT5M-006	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000480529.1	NT5M-005	392	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,617 bps, Translation length: 228 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NPB1

CCDS

This transcript is a member of the Human CCDS set: CCDS32581

Version

ENST00000389022.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000446045 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.