Transcript: ENST00000375916.3 APOM-001

Description

apolipoprotein M [Source:HGNC Symbol;Acc:13916]

Gene Synonyms

ApoM, G3A, G3a, HSPC336, NG20, apo-M

Location

About this transcript

This transcript has 6 exons, is annotated with 4 domains and features, is associated with 1179 variant alleles and maps to 1131 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375916.3	APOM-001	1184	188aa	ENSP00000365081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4710	O95445	NM_019101.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375918.2	APOM-003	922	129aa	ENSP00000365083.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SRP5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375920.4	APOM-002	709	116aa	ENSP00000365085.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59004	O95445	NM_001256169.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,184 bps, Translation length: 188 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95445

CCDS

This transcript is a member of the Human CCDS set: CCDS4710

Version

ENST00000375916.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000076527 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.