EMBL-EBI User Survey 2024

Do data resources managed by EMBL-EBI and our collaborators make a difference to your work?

Please take 10 minutes to fill in our annual user survey, and help us make the case for why sustaining open data resources is critical for life sciences research.

Survey link: https://www.surveymonkey.com/r/HJKYKTT?channel=[webpage]

Human (GRCh37.p13)
Description

caspase 12 (gene/pseudogene) [Source:HGNC Symbol;Acc:19004]

Gene Synonyms

CASP-12, CASP12P1

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 5329 variant alleles and maps to 327 oligo probes.

Gene
Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeqFlags
ENST00000422698.2CASP12-0081451341aaENSP00000427128.1
 
Protein coding
CCDS55785Q6UXS9 NM_001191016.1Ensembl CanonicalGENCODE basic
ENST00000375726.2CASP12-0021306341aaENSP00000424038.1
 
Protein coding
CCDS55785Q6UXS9 -GENCODE basic
ENST00000446862.1CASP12-0041196277aaENSP00000425652.1
 
Protein coding
D6RJG1 -GENCODE basic
ENST00000441710.1CASP12-0051168295aaENSP00000423970.1
 
Protein coding
D6RBW4 -GENCODE basic
ENST00000448103.1CASP12-0071071224aaENSP00000423899.1
 
Protein coding
D6RC33 -GENCODE basic
ENST00000494737.1CASP12-010961226aaENSP00000421815.1
 
Protein coding
D6RAQ6 -GENCODE basic
ENST00000447913.1CASP12-003819140aaENSP00000426427.1
 
Protein coding
D6RG27 -GENCODE basic
ENST00000508062.1CASP12-011774257aaENSP00000426566.1
 
Protein coding
Q6UXS9 -GENCODE basic
ENST00000433738.1CASP12-006709142aaENSP00000427437.1
 
Protein coding
D6RIR9 -GENCODE basic
ENST00000417998.1CASP12-0091401168aaENSP00000424963.1
 
Nonsense mediated decay
Q6UXS9 --
ENST00000458137.1CASP12-0011166168aaENSP00000421408.1
 
Nonsense mediated decay
Q6UXS9 --
Statistics

Exons: 7, Coding exons: 4, Transcript length: 1,166 bps, Translation length: 168 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6UXS9

Version

ENST00000458137.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:
OTTHUMT00000337825 (version 1)
Annotation Attributes

dotter confirmed [Definitions]