Transcript: ENST00000395287.1 BRD2-005

Description

bromodomain containing 2 [Source:HGNC Symbol;Acc:1103]

Gene Synonyms

D6S113E, FSH, FSRG1, KIAA9001, NAT, RING3, RNF3

Location

Chromosome 6: 32,940,507-32,949,282 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 35 domains and features, is associated with 6931 variant alleles and maps to 1951 oligo probes.

Gene

This transcript is a product of gene ENSG00000204256.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395289.2	BRD2-201	4898	836aa	ENSP00000378704.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56420	P25440 U3KQA6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374825.4	BRD2-001	4894	801aa	ENSP00000363958.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4762	P25440 Q658Y7 U3KQA6	NM_005104.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000374831.4	BRD2-002	4807	801aa	ENSP00000363964.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4762	P25440 Q658Y7 U3KQA6	NM_001113182.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443797.2	BRD2-202	4637	681aa	ENSP00000413495.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q658Y7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395287.1	BRD2-005	3467	836aa	ENSP00000378702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56420	P25440 U3KQA6	NM_001199455.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449025.1	BRD2-006	3210	807aa	ENSP00000409613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q658Y7	NM_001199456.1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449085.2	BRD2-203	3013	754aa	ENSP00000409145.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56421	P25440 Q658Y7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000607833.1	BRD2-023	2338	552aa	ENSP00000475691.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQA6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000456339.1	BRD2-009	887	296aa	ENSP00000411195.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000496118.2	BRD2-008	735	162aa	ENSP00000464077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3QR72	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000606059.1	BRD2-026	565	159aa	ENSP00000475288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482914.1	BRD2-004	4834	147aa	ENSP00000431514.1	Nonsense mediated decay		E9PKQ9	-	-
ENST00000495733.1	BRD2-003	3404	401aa	ENSP00000436322.1	Nonsense mediated decay		E9PIQ3	-	-
ENST00000481259.1	BRD2-012	667	137aa	ENSP00000433751.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000580234.1	BRD2-019	718	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581002.1	BRD2-020	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000584808.1	BRD2-018	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469132.1	BRD2-007	1628	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000464592.1	BRD2-011	1590	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463639.1	BRD2-013	946	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482838.1	BRD2-014	759	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,467 bps, Translation length: 836 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P25440

CCDS

This transcript is a member of the Human CCDS set: CCDS56420

Version

ENST00000395287.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000276545 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395287.1 BRD2-005

Summary