Transcript: ENST00000453095.1 TGM2-003

Description

transglutaminase 2 [Source:HGNC Symbol;Acc:11778]

Gene Synonyms

G-ALPHA-h, GNAH, HEL-S-45, TG2, TGC

Location

Chromosome 20: 36,779,414-36,794,980 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 5 domains and features, is associated with 7173 variant alleles and maps to 142 oligo probes.

Gene

This transcript is a product of gene ENSG00000198959.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361475.2	TGM2-002	3996	687aa	ENSP00000355330.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13302	A2A299 A2A2A0 P21980 Q6DKH2	NM_198951.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536701.1	TGM2-201	2157	606aa	ENSP00000444701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIT7 Q6DKH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000536724.1	TGM2-202	2041	627aa	ENSP00000437479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H6P0 Q6DKH2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000373403.3	TGM2-004	1018	280aa	ENSP00000362502.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A299 A2A2A0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000453095.1	TGM2-003	693	159aa	ENSP00000387642.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2A2A0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000469269.1	TGM2-007	3467	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474777.1	TGM2-001	2287	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468262.1	TGM2-006	1862	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 693 bps, Translation length: 159 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000453095.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000276738 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000453095.1 TGM2-003

Summary