Transcript: ENST00000553267.1 PAX9-004

Description

paired box 9 [Source:HGNC Symbol;Acc:8623]

Gene Synonyms

PAX9, STHAG3

Location

Chromosome 14: 37,126,773-37,131,213 forward strand.

About this transcript

This transcript has 2 exons, is associated with 2428 variant alleles and maps to 111 oligo probes.

Gene

This transcript is a product of gene ENSG00000198807.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361487.6	PAX9-001	4514	341aa	ENSP00000355245.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9662	E9KY40 P55771 Q2L4T1 Q7Z4A7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000402703.2	PAX9-201	3102	341aa	ENSP00000384817.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9662	E9KY40 P55771 Q2L4T1 Q7Z4A7	NM_006194.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554201.1	PAX9-002	1289	96aa	ENSP00000450434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V233	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557107.1	PAX9-003	995	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553267.1	PAX9-004	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000555639.1	PAX9-005	553	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 645 bps,

Version

ENST00000553267.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000443554 (version 1)

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Transcript: ENST00000553267.1 PAX9-004

Summary