Transcript: ENST00000578339.1 ZNF830-002

Description

zinc finger protein 830 [Source:HGNC Symbol;Acc:28291]

Gene Synonyms

CCDC16, MGC20398, OMCG1

Location

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 380 variant alleles and maps to 208 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361952.3	ZNF830-001	1657	372aa	ENSP00000354518.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32618	J3QQQ3 Q96NB3	NM_052857.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578339.1	ZNF830-002	667	106aa	ENSP00000463839.1	Nonsense mediated decay		J3QQQ3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 667 bps, Translation length: 106 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000578339.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448019 (version 1)