Transcript: ENST00000480055.1 SMURF1-004

Description

SMAD specific E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:16807]

Gene Synonyms

KIAA1625

Location

About this transcript

This transcript has 7 exons, is associated with 13055 variant alleles and maps to 155 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000361125.1	SMURF1-001	5737	757aa	ENSP00000354621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34690	D6W5S0 Q9HCE7	NM_020429.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000361368.2	SMURF1-002	5581	731aa	ENSP00000355326.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34689	Q9HCE7	NM_181349.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480055.1	SMURF1-004	1012	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472627.1	SMURF1-003	825	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,012 bps,

Version

ENST00000480055.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000335022 (version 1)