Transcript: ENST00000356388.4 SPRED2-001

Description

sprouty-related, EVH1 domain containing 2 [Source:HGNC Symbol;Acc:17722]

Gene Synonyms

FLJ21897, FLJ31917, Spred-2

Location

Chromosome 2: 65,537,985-65,659,311 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 10 domains and features, is associated with 53721 variant alleles and maps to 552 oligo probes.

Gene

This transcript is a product of gene ENSG00000198369.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356388.4	SPRED2-001	4097	418aa	ENSP00000348753.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33211	C9J623 Q7Z698	NM_181784.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443619.2	SPRED2-008	1800	415aa	ENSP00000393697.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46308	Q7Z698	NM_001128210.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000452315.1	SPRED2-006	1365	432aa	ENSP00000390595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JG63	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000421087.1	SPRED2-002	701	233aa	ENSP00000407627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2T4	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000440972.1	SPRED2-007	555	116aa	ENSP00000406481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J623	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000427238.1	SPRED2-005	467	47aa	ENSP00000393148.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000426832.1	SPRED2-004	498	103aa	ENSP00000414551.1	Nonsense mediated decay		H7C3Y6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000474228.1	SPRED2-003	876	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 4,097 bps, Translation length: 418 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z698

CCDS

This transcript is a member of the Human CCDS set: CCDS33211

Version

ENST00000356388.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000327632 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000356388.4 SPRED2-001

Summary