Transcript: ENST00000442801.1 SULT1C2-006

Description

sulfotransferase family, cytosolic, 1C, member 2 [Source:HGNC Symbol;Acc:11456]

Gene Synonyms

ST1C1, ST1C2, SULT1C1, humSULTC2

Location

Chromosome 2: 108,910,132-108,925,007 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 6290 variant alleles and maps to 326 oligo probes.

Gene

This transcript is a product of gene ENSG00000198203.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000326853.5	SULT1C2-002	2828	307aa	ENSP00000319622.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2076	O00338	NM_176825.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000251481.6	SULT1C2-001	2795	296aa	ENSP00000251481.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2075	O00338	NM_001056.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000437390.2	SULT1C2-007	1359	310aa	ENSP00000399651.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DLP0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409880.1	SULT1C2-005	1206	259aa	ENSP00000387054.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZF7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409067.2	SULT1C2-009	928	226aa	ENSP00000387340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000438339.1	SULT1C2-004	576	130aa	ENSP00000401996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JSR0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442801.1	SULT1C2-006	872	116aa	ENSP00000415194.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000492554.1	SULT1C2-008	173	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000495441.1	SULT1C2-003	6366	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 872 bps, Translation length: 116 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000442801.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000329968 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000442801.1 SULT1C2-006

Summary