Transcript: ENST00000358290.4 HSD17B11-001

Description

hydroxysteroid (17-beta) dehydrogenase 11 [Source:HGNC Symbol;Acc:22960]

Gene Synonyms

17-BETA-HSD11, 17-BETA-HSDXI, 17BHSD11, DHRS8, PAN1B, RETSDR2, RetSDR2, SDR16C2

Location

Chromosome 4: 88,257,762-88,312,538 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 22935 variant alleles and maps to 438 oligo probes.

Gene

This transcript is a product of gene ENSG00000198189.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358290.4	HSD17B11-001	1885	300aa	ENSP00000351035.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3619	Q8NBQ5	NM_016245.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507286.1	HSD17B11-003	851	256aa	ENSP00000423775.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RCD0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507518.1	HSD17B11-004	843	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512344.1	HSD17B11-006	641	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502576.1	HSD17B11-007	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508413.1	HSD17B11-008	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513854.1	HSD17B11-005	569	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,885 bps, Translation length: 300 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8NBQ5

CCDS

This transcript is a member of the Human CCDS set: CCDS3619

Version

ENST00000358290.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000253041 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000358290.4 HSD17B11-001

Summary