Transcript: ENST00000395686.3 ERO1L-001

Description

ERO1-like (S. cerevisiae) [Source:HGNC Symbol;Acc:13280]

Gene Synonyms

ERO1-alpha, ERO1A, ERO1LA

Location

Chromosome 14: 53,106,634-53,162,423 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 8 domains and features, is associated with 22341 variant alleles and maps to 690 oligo probes.

Gene

This transcript is a product of gene ENSG00000197930.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395686.3	ERO1L-001	5285	468aa	ENSP00000379042.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9709	G3V2H0 Q96HE7	NM_014584.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000556358.1	ERO1L-008	951	75aa	ENSP00000450655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V2H0	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554251.1	ERO1L-004	555	169aa	ENSP00000452269.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5B3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554019.1	ERO1L-002	2094	257aa	ENSP00000451204.1	Nonsense mediated decay		G3V3E6	-	-
ENST00000556039.1	ERO1L-003	1855	257aa	ENSP00000452020.1	Nonsense mediated decay		G3V3E6	-	-
ENST00000556223.1	ERO1L-005	567	125aa	ENSP00000452093.1	Nonsense mediated decay		G3V503	-	-
ENST00000556769.1	ERO1L-007	934	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000555069.1	ERO1L-009	846	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000553714.1	ERO1L-010	672	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000557178.1	ERO1L-006	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 5,285 bps, Translation length: 468 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96HE7

CCDS

This transcript is a member of the Human CCDS set: CCDS9709

Version

ENST00000395686.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000276892 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000395686.3 ERO1L-001

Summary