Transcript: ENST00000358064.3 HIST4H4-001

Description

histone cluster 4, H4 [Source:HGNC Symbol;Acc:20510]

Gene Synonyms

FO108, H4, H4.k, H4/A, H4/I, H4/b, H4/c, H4/d, H4/e, H4/g, H4/h, H4/j, H4/k, H4/m, H4/n, H4/o, H4/p, H4F2, H4F2iii, H4F2iv, H4FA, H4FB, H4FC, H4FD, H4FE, H4FG, H4FH, H4FI, H4FJ, H4FK, H4FM, H4FN, H4M, HIST1H4L, HIST2H4, MGC24116, dJ160A22.1, dJ160A22.2, dJ221C16.1, dJ221C16.9

Location

Chromosome 12: 14,920,933-14,924,065 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 14 domains and features, is associated with 1754 variant alleles and maps to 225 oligo probes.

Gene

This transcript is a product of gene ENSG00000197837.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000539745.1	HIST4H4-002	577	103aa	ENSP00000443017.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8665	B2R4R0 P62805 Q6B823	NM_175054.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000358064.3	HIST4H4-001	1918	103aa	ENSP00000350767.3	Nonsense mediated decay	CCDS8665	B2R4R0 P62805 Q6B823	-	-
ENST00000541592.1	HIST4H4-003	810	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000540565.1	HIST4H4-005	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537853.1	HIST4H4-004	448	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000537096.1	HIST4H4-006	372	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 1,918 bps, Translation length: 103 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P62805

CCDS

This transcript is a member of the Human CCDS set: CCDS8665

Version

ENST00000358064.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000400839 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000358064.3 HIST4H4-001

Summary