Transcript: ENST00000561903.2 EME2-003

Description

essential meiotic structure-specific endonuclease subunit 2 [Source:HGNC Symbol;Acc:27289]

Gene Synonyms

FLJ00151, SLX2B, gs125

Location

Chromosome 16: 1,825,316-1,831,709 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 4757 variant alleles and maps to 351 oligo probes.

Gene

This transcript is a product of gene ENSG00000197774.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000568449.1	EME2-001	1234	379aa	ENSP00000457353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58404	A4GXA9	NM_001257370.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000307394.7	EME2-201	1335	444aa	ENSP00000303779.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A4GXA9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561903.2	EME2-003	4586	190aa	ENSP00000457966.2	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000564182.1	EME2-006	549	115aa	ENSP00000456946.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000570069.1	EME2-002	5613	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000561564.1	EME2-004	480	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000565326.1	EME2-005	434	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 4,586 bps, Translation length: 190 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000561903.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000433194 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000561903.2 EME2-003

Summary