Transcript: ENST00000493143.1 PSAP-003

Description

prosaposin [Source:HGNC Symbol;Acc:9498]

Gene Synonyms

GLBA, SAP1

Location

About this transcript

This transcript has 3 exons, is associated with 1240 variant alleles and maps to 152 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394936.3	PSAP-001	2866	524aa	ENSP00000378394.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7311	P07602	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394934.1	PSAP-201	2825	526aa	ENSP00000378392.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JIZ6	NM_002778.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493143.1	PSAP-003	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000495196.1	PSAP-004	344	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 576 bps,

Version

ENST00000493143.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000048555 (version 1)