Transcript: ENST00000294997.10 CR1L-001

Description

complement component (3b/4b) receptor 1-like [Source:HGNC Symbol;Acc:2335]

Location

About this transcript

This transcript has 13 exons, is annotated with 34 domains and features, is associated with 27828 variant alleles and maps to 468 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000508064.2	CR1L-003	1788	569aa	ENSP00000421736.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44310	Q2VPA4	NM_175710.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000294997.10	CR1L-001	1587	388aa	ENSP00000434864.1	Nonsense mediated decay		Q2VPA4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530905.1	CR1L-002	930	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000430248.1	CR1L-005	351	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000531844.1	CR1L-004	663	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 9, Transcript length: 1,587 bps, Translation length: 388 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2VPA4

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000294997.10

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000088509 (version 6)