Transcript: ENST00000533345.1 PARVA-003

Description

parvin, alpha [Source:HGNC Symbol;Acc:14652]

Gene Synonyms

CH-ILKBP, FLJ10793, FLJ12254, MXRA2

Location

Chromosome 11: 12,419,788-12,535,351 forward strand.

About this transcript

This transcript has 8 exons, is associated with 47909 variant alleles and maps to 216 oligo probes.

Gene

This transcript is a product of gene ENSG00000197702.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000334956.8	PARVA-001	4458	412aa	ENSP00000334008.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44541	J3KNQ4	NM_018222.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000550549.1	PARVA-203	3106	372aa	ENSP00000447198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9NVD7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000539723.1	PARVA-202	1544	372aa	ENSP00000438967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H1R9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538608.1	PARVA-201	1219	290aa	ENSP00000442960.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z952	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000528916.1	PARVA-004	897	209aa	ENSP00000435860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PS97	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526746.1	PARVA-005	345	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000533392.1	PARVA-006	256	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000530755.1	PARVA-002	3345	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000533345.1	PARVA-003	1215	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,215 bps,

Version

ENST00000533345.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386167 (version 1)

Annotation Attributes

dotter confirmed [Definitions]

Favourite species

All species

Recent locations

Transcript: ENST00000533345.1 PARVA-003

Summary