Transcript: ENST00000531409.1 CYP2F1-003

Description

cytochrome P450, family 2, subfamily F, polypeptide 1 [Source:HGNC Symbol;Acc:2632]

Gene Synonyms

C2F1, CYP2F

Location

Chromosome 19: 41,620,337-41,631,722 forward strand.

About this transcript

This transcript has 8 exons, is associated with 6411 variant alleles and maps to 332 oligo probes.

Gene

This transcript is a product of gene ENSG00000197446.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331105.2	CYP2F1-001	1720	491aa	ENSP00000333534.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS12572	P24903	NM_000774.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000439903.2	CYP2F1-007	710	81aa	ENSP00000443424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000534009.1	CYP2F1-006	516	172aa	ENSP00000470136.1	Non stop decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000532164.2	CYP2F1-004	1662	320aa	ENSP00000471416.1	Nonsense mediated decay		Q32MN5	-	-
ENST00000531409.1	CYP2F1-003	2080	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000526093.1	CYP2F1-002	930	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 2,080 bps,

Version

ENST00000531409.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000394544 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000531409.1 CYP2F1-003

Summary