Transcript: ENST00000435065.2 SLC22A5-201

Description

solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:HGNC Symbol;Acc:10969]

Gene Synonyms

CDSP, OCTN2, OCTN2VT, SCD

Location

Chromosome 5: 131,705,665-131,729,964 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 22 domains and features, is associated with 10060 variant alleles and maps to 394 oligo probes.

Gene

This transcript is a product of gene ENSG00000197375.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000245407.3	SLC22A5-001	3237	557aa	ENSP00000245407.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4154	O76082	NM_003060.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435065.2	SLC22A5-201	1746	581aa	ENSP00000402760.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZC0 O76082	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415928.1	SLC22A5-004	720	240aa	ENSP00000388838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZC0	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000447841.1	SLC22A5-005	998	37aa	ENSP00000389284.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448810.1	SLC22A5-002	852	136aa	ENSP00000401860.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000437841.2	SLC22A5-008	850	141aa	ENSP00000400553.1	Nonsense mediated decay		F8WCC9	-	-
ENST00000479605.1	SLC22A5-007	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000461013.1	SLC22A5-006	10435	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475308.1	SLC22A5-003	3693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,746 bps, Translation length: 581 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O76082

Version

ENST00000435065.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000435065.2 SLC22A5-201

Summary