Transcript: ENST00000375400.3 SVIL-001

Description

supervillin [Source:HGNC Symbol;Acc:11480]

Location

Chromosome 10: 29,746,267-30,024,733 reverse strand.

About this transcript

This transcript has 36 exons, is annotated with 32 domains and features, is associated with 118564 variant alleles and maps to 1285 oligo probes.

Gene

This transcript is a product of gene ENSG00000197321.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000375398.2	SVIL-201	7994	2214aa	ENSP00000364547.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7164	O95425 Q569J5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000355867.4	SVIL-003	7586	2214aa	ENSP00000348128.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7164	O95425 Q569J5	NM_021738.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000375400.3	SVIL-001	6729	1788aa	ENSP00000364549.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7163	O95425 Q569J5	NM_003174.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000535393.1	SVIL-202	3556	1128aa	ENSP00000445472.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H2Q5 Q569J5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538146.1	SVIL-203	2211	585aa	ENSP00000440343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXV0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460007.1	SVIL-011	779	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464984.1	SVIL-007	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474106.1	SVIL-009	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491872.1	SVIL-008	454	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482607.1	SVIL-010	368	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000464726.1	SVIL-004	287	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483758.1	SVIL-013	262	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465422.1	SVIL-002	196	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490031.1	SVIL-006	190	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 36, Coding exons: 31, Transcript length: 6,729 bps, Translation length: 1,788 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95425

CCDS

This transcript is a member of the Human CCDS set: CCDS7163

Version

ENST00000375400.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000047393 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000375400.3 SVIL-001

Summary