Transcript: ENST00000417069.2 ENTPD4-002

Description

ectonucleoside triphosphate diphosphohydrolase 4 [Source:HGNC Symbol;Acc:14573]

Gene Synonyms

KIAA0392, LALP70, LAP70, LYSAL1, NTPDase-4, UDPase

Location

Chromosome 8: 23,290,439-23,315,208 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 7 domains and features, is associated with 11323 variant alleles and maps to 482 oligo probes.

Gene

This transcript is a product of gene ENSG00000197217.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358689.4	ENTPD4-001	5861	616aa	ENSP00000351520.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6041	E5RIB2 Q9Y227	NM_004901.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356206.6	ENTPD4-004	2097	571aa	ENSP00000348536.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIB2 Q8NE73	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000417069.2	ENTPD4-002	2063	608aa	ENSP00000408573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47827	E5RIB2 Q9Y227	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518471.1	ENTPD4-012	790	214aa	ENSP00000430579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YBY8	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518718.1	ENTPD4-005	566	127aa	ENSP00000429455.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIB2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000519839.1	ENTPD4-006	351	117aa	ENSP00000427724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000521321.1	ENTPD4-011	579	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522913.1	ENTPD4-008	573	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000523958.1	ENTPD4-003	2026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000522255.1	ENTPD4-009	931	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000520936.1	ENTPD4-010	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,063 bps, Translation length: 608 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y227

CCDS

This transcript is a member of the Human CCDS set: CCDS47827

Version

ENST00000417069.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000375475 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000417069.2 ENTPD4-002

Summary