Transcript: ENST00000553952.1 GMFB-003

Description

glia maturation factor, beta [Source:HGNC Symbol;Acc:4373]

Gene Synonyms

GMF

Location

Chromosome 14: 54,949,846-54,955,712 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 2652 variant alleles and maps to 88 oligo probes.

Gene

This transcript is a product of gene ENSG00000197045.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000358056.3	GMFB-001	4301	142aa	ENSP00000350757.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9718	P60983	NM_004124.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000554908.1	GMFB-002	6721	38aa	ENSP00000452410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V3X4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000553333.1	GMFB-004	591	150aa	ENSP00000451920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V4P8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000554247.1	GMFB-005	605	38aa	ENSP00000451473.1	Nonsense mediated decay		G3V3X4	-	-
ENST00000553566.1	GMFB-008	391	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000553952.1	GMFB-003	710	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554163.1	GMFB-006	682	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000554682.1	GMFB-007	298	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 710 bps,

Version

ENST00000553952.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000411177 (version 1)

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Transcript: ENST00000553952.1 GMFB-003

Summary