Transcript: ENST00000594838.1 AP2A1-009

Description

adaptor-related protein complex 2, alpha 1 subunit [Source:HGNC Symbol;Acc:561]

Gene Synonyms

ADTAA, AP2-ALPHA, CLAPA1

Location

Chromosome 19: 50,305,779-50,309,190 forward strand.

About this transcript

This transcript has 7 exons, is associated with 1976 variant alleles and maps to 337 oligo probes.

Gene

This transcript is a product of gene ENSG00000196961.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359032.5	AP2A1-008	3286	977aa	ENSP00000351926.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46148	O95782 Q8N9K4	NM_014203.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354293.5	AP2A1-001	3388	955aa	ENSP00000346246.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46149	O95782	NM_130787.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000597774.1	AP2A1-004	2196	57aa	ENSP00000472492.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000600199.1	AP2A1-010	2381	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000600466.1	AP2A1-003	2903	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000601356.1	AP2A1-002	2238	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000593788.1	AP2A1-007	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000594838.1	AP2A1-009	611	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 611 bps,

Version

ENST00000594838.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000465813 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000594838.1 AP2A1-009

Summary