Transcript: ENST00000355612.2 KRT39-001

Description

keratin 39 [Source:HGNC Symbol;Acc:32971]

Gene Synonyms

CK-39, K39, KA35

Location

About this transcript

This transcript has 7 exons, is annotated with 17 domains and features, is associated with 3829 variant alleles and maps to 364 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000355612.2	KRT39-001	1696	491aa	ENSP00000347823.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11382	J3QRE9 Q6A163	NM_213656.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000578078.1	KRT39-003	1689	184aa	ENSP00000464180.1	Nonsense mediated decay		J3QRE9	-	-
ENST00000578029.1	KRT39-002	777	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,696 bps, Translation length: 491 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6A163

CCDS

This transcript is a member of the Human CCDS set: CCDS11382

Version

ENST00000355612.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000257287 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.