Transcript: ENST00000577985.1 AMZ2-007

Description

archaelysin family metallopeptidase 2 [Source:HGNC Symbol;Acc:28041]

Location

Chromosome 17: 66,245,341-66,253,296 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 3415 variant alleles and maps to 615 oligo probes.

Gene

This transcript is a product of gene ENSG00000196704.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359904.3	AMZ2-001	2402	360aa	ENSP00000352976.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11674	J3KRD0 J3KS38 J3KSH1 J3QLK6 Q86W34	NM_016627.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577985.1	AMZ2-007	2257	360aa	ENSP00000464635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11674	J3KRD0 J3KS38 J3KSH1 J3QLK6 Q86W34	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000359783.4	AMZ2-004	1722	302aa	ENSP00000352831.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32714	Q86W34	NM_001033574.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000577866.1	AMZ2-006	1492	360aa	ENSP00000464133.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11674	J3KRD0 J3KS38 J3KSH1 J3QLK6 Q86W34	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392720.2	AMZ2-003	1378	360aa	ENSP00000376481.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11674	J3KRD0 J3KS38 J3KSH1 J3QLK6 Q86W34	NM_001033570.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580753.1	AMZ2-002	1339	360aa	ENSP00000463012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11674	J3KRD0 J3KS38 J3KSH1 J3QLK6 Q86W34	NM_001033572.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000584494.1	AMZ2-015	897	248aa	ENSP00000461935.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRD0 J3KS38 J3KSH1 J3QLK6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000577273.1	AMZ2-008	895	201aa	ENSP00000462140.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KRS2 J3KSH1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000580548.1	AMZ2-009	829	195aa	ENSP00000462484.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KSH1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000579724.1	AMZ2-014	722	206aa	ENSP00000463596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KS38 J3KSH1 J3QLK6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000580837.1	AMZ2-016	713	197aa	ENSP00000462292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KS38 J3KSH1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584837.1	AMZ2-010	672	221aa	ENSP00000463053.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KTM1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000584350.1	AMZ2-011	845	23aa	ENSP00000463857.1	Nonsense mediated decay		J3QQR3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000584836.1	AMZ2-012	783	76aa	ENSP00000463344.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000585050.1	AMZ2-018	784	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000581779.1	AMZ2-017	444	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000582430.1	AMZ2-013	387	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000578175.1	AMZ2-005	2276	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,257 bps, Translation length: 360 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86W34

CCDS

This transcript is a member of the Human CCDS set: CCDS11674

Version

ENST00000577985.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000448268 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000577985.1 AMZ2-007

Summary