Transcript: ENST00000562058.1 SULT1A1-003

Description

sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 [Source:HGNC Symbol;Acc:11453]

Gene Synonyms

HAST1/HAST2, P-PST, PST, ST1A1, ST1A3, STP, STP1, TSPST1

Location

Chromosome 16: 28,616,913-28,634,874 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 2 domains and features, is associated with 9877 variant alleles and maps to 737 oligo probes.

Gene

This transcript is a product of gene ENSG00000196502.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000395609.1	SULT1A1-202	1871	295aa	ENSP00000378972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32420	H3BRY5 P50225 Q9UMT9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395607.1	SULT1A1-201	1386	295aa	ENSP00000378971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32420	H3BRY5 P50225 Q9UMT9	NM_177534.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000350842.4	SULT1A1-001	1282	217aa	ENSP00000329399.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10637	P50225 Q9UMT9	NM_177536.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000314752.7	SULT1A1-002	1162	295aa	ENSP00000321988.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32420	H3BRY5 P50225 Q9UMT9	NM_177529.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000569554.1	SULT1A1-004	1155	295aa	ENSP00000457912.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS32420	H3BRY5 P50225 Q9UMT9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566189.1	SULT1A1-005	939	281aa	ENSP00000456459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BRY5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000567512.1	SULT1A1-009	615	169aa	ENSP00000455979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQX5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562058.1	SULT1A1-003	1876	56aa	ENSP00000456215.1	Nonsense mediated decay		H3BMH9	-	-
ENST00000564818.1	SULT1A1-006	1653	56aa	ENSP00000454388.1	Nonsense mediated decay		H3BMH9	-	-
ENST00000563493.1	SULT1A1-008	1651	85aa	ENSP00000457083.1	Nonsense mediated decay		H3BT96	-	-
ENST00000567998.1	SULT1A1-007	7948	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 3, Transcript length: 1,876 bps, Translation length: 56 residues

Version

ENST00000562058.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000430984 (version 1)

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Transcript: ENST00000562058.1 SULT1A1-003

Summary